Batch running of SLEUTH

A script is included that will create a HT-Condor submit file.

Usage:

create_sleuth_condor_batch.py [-h] --sleuth_path SLEUTH_PATH
                                   --locations_dir LOCATIONS_DIR
                                   --predict_end PREDICT_END
                                   [--mpi_cores MPI_CORES]
                                   [--montecarlo_iterations MONTECARLO_ITERATIONS]

Arguments:

-h, --help	show this help message and exit
--sleuth_path SLEUTH_PATH
	path to SLEUTH directory
--locations_dir LOCATIONS_DIR
	path to regions dir
--mpi_cores MPI_CORES
	number of cores available for MPI, if 0 (default) don’t use mpi
--predict_end PREDICT_END
	ending year of prediction interval
--montecarlo_iterations MONTECARLO_ITERATIONS
	monte carlo iterations

Running this script will create a submit.condor file in the supplied LOCATIONS_DIR, with proper invocations of the sleuth_run.py script.

This file can then be submited for execution:

$ cd LOCATIONS_DIR
$ condor_submit submit.condor